diff --git a/apps/web/src/components/chat/ChangedFilesTree.tsx b/apps/web/src/components/chat/ChangedFilesTree.tsx
index 0174a77088358e29ab459f327cc33bc2e62c0507..a13ddad30dbc101f0eafc8258e017f079e3b40cf 100644
--- a/apps/web/src/components/chat/ChangedFilesTree.tsx
+++ b/apps/web/src/components/chat/ChangedFilesTree.tsx
@@ -50,6 +50,7 @@ export const ChangedFilesTree = memo(function ChangedFilesTree(props: {
         <div key={`dir:${node.path}`}>
           <button
             type="button"
+            data-scroll-anchor-ignore
             className="group flex w-full items-center gap-1.5 rounded-md py-1 pr-2 text-left hover:bg-background/80"
             style={{ paddingLeft: `${leftPadding}px` }}
             onClick={() => toggleDirectory(node.path, depth === 0)}
diff --git a/apps/web/src/components/chat/MessagesTimeline.tsx b/apps/web/src/components/chat/MessagesTimeline.tsx
index f3174030eff4f010baf58feafa2a17933e8c395a..9e0b895912cd35a3de898628802ee0021c1197d9 100644
--- a/apps/web/src/components/chat/MessagesTimeline.tsx
+++ b/apps/web/src/components/chat/MessagesTimeline.tsx
@@ -264,9 +264,14 @@ export const MessagesTimeline = memo(function MessagesTimeline({
     rowVirtualizer.measure();
   }, [rowVirtualizer, timelineWidthPx]);
   useEffect(() => {
-    rowVirtualizer.shouldAdjustScrollPositionOnItemSizeChange = (_item, _delta, instance) => {
+    rowVirtualizer.shouldAdjustScrollPositionOnItemSizeChange = (item, _delta, instance) => {
       const viewportHeight = instance.scrollRect?.height ?? 0;
       const scrollOffset = instance.scrollOffset ?? 0;
+      const itemIntersectsViewport =
+        item.end > scrollOffset && item.start < scrollOffset + viewportHeight;
+      if (itemIntersectsViewport) {
+        return false;
+      }
       const remainingDistance = instance.getTotalSize() - (scrollOffset + viewportHeight);
       return remainingDistance > AUTO_SCROLL_BOTTOM_THRESHOLD_PX;
     };
@@ -483,6 +488,7 @@ export const MessagesTimeline = memo(function MessagesTimeline({
                             type="button"
                             size="xs"
                             variant="outline"
+                            data-scroll-anchor-ignore
                             onClick={() => onToggleAllDirectories(turnSummary.turnId)}
                           >
                             {allDirectoriesExpanded ? "Collapse all" : "Expand all"}